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Chinese Journal of Cell and Stem Cell(Electronic Edition) ›› 2023, Vol. 13 ›› Issue (03): 159-166. doi: 10.3877/cma.j.issn.2095-1221.2023.03.005

• Original Research • Previous Articles     Next Articles

The transcriptome characteristics of single cells in the peripheral blood mononuclear cells between frail and non-frail elderly

Jing Zeng, Jiao Fan, Jingqi Shi, jing Liu, Chunlin Li, Guogang Xu, Tianzhi Li()   

  1. Department of Endocrinology, the Second Medical Center, Chinese PLA General Hospital, Beijing 100853, China; National Clinical Research Center for Geriatric Diseases, Chinese PLA General Hospital, Beijing 100853, China
    Institute of Geriatrics, the Second Medical Center, Chinese PLA General Hospital, Beijing 100853, China; National Clinical Research Center for Geriatric Diseases, Chinese PLA General Hospital, Beijing 100853, China
    National Clinical Research Center for Geriatric Diseases, Chinese PLA General Hospital, Beijing 100853, China; The Second Medical Center, Chinese PLA General Hospital, Beijing 100853, China
  • Received:2023-03-16 Online:2023-06-01 Published:2023-10-27
  • Contact: Tianzhi Li

Abstract:

Objective

Recent studies have found that aging and frailty affect transcriptome heterogeneity and variability. Based on the existing evidence, this study aims to explore the differences in the transcriptome characteristics of peripheral blood of older people under different frailty states.

Methods

The dataset (GSE157007) was downloaded from the Gene Expression Omnibus (GEO) . The distribution and characteristics of cells and the differentially expressed genes between frail and non-frail elderly were analyzed. The differentially expressed genes were performed by Kyoto encyclopedia of genes and genomes (KEGG) pathway enrichment analysis. The interaction and communication between cells were also studied by CellChat package.

Results

Compared with the non-frail group, the proportion of T cells and monocytes in the frail group was reduced, while the ratio of natural killer cells was increased. No significant difference was found in the cluster of B cells. And there were significant differences in gene expression among cell clusters. KEGG pathway analysis showed that differentially expressed genes were mainly enriched in antigen presentation, Tumor necrosis factor signaling pathway, chemokine signaling pathways. Further analysis of cell communication showed that the number and intensity of interactions between cells of the frail group were less than those in the non-frail group, and frailty states might affect the mode and signaling pathway of interactions between cells.

Conclusion

Significant differences were observed in the transcriptome characteristics of single cells in older people with different frailty states.

Key words: Frailty, Older adults, Single cell sequencing, Cell communication, Peripheral blood

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