切换至 "中华医学电子期刊资源库"

中华细胞与干细胞杂志(电子版) ›› 2023, Vol. 13 ›› Issue (04) : 220 -228. doi: 10.3877/cma.j.issn.2095-1221.2023.04.004

论著

单细胞RNA测序技术探究CCN2基因在特纳综合征胎儿颈部淋巴水囊瘤中的关键作用
李颖思, 符芳, 杨昕, 邓琼, 周航, 程肯, 李东至, 廖灿()   
  1. 510623 广州医科大学附属广州市妇女儿童医疗中心产前诊断中心
    510641 广州,华南理工大学
  • 收稿日期:2022-02-16 出版日期:2023-08-01
  • 通信作者: 廖灿
  • 基金资助:
    国家自然科学基金(81873836,81771594); 广东省自然科学基金(2017A030313460、2019A1515012034)

The key role of CCN2 gene in fetal unchal cystic hygromas with Turner syndrome by single-cell RNA sequencing

yingsi Li, Fang Fu, Xin Yang, Qiong Deng, Hang Zhou, Ken Cheng, Dongzhi Li, Can Liao()   

  1. Prenatal Diagnostic center, Guangzhou Women and Children Hospital, Guangzhou Medical University, Guangzhou 510623, China
    School of Medicine, South China University of Technology, Guangzhou 510641, China
  • Received:2022-02-16 Published:2023-08-01
  • Corresponding author: Can Liao
引用本文:

李颖思, 符芳, 杨昕, 邓琼, 周航, 程肯, 李东至, 廖灿. 单细胞RNA测序技术探究CCN2基因在特纳综合征胎儿颈部淋巴水囊瘤中的关键作用[J]. 中华细胞与干细胞杂志(电子版), 2023, 13(04): 220-228.

yingsi Li, Fang Fu, Xin Yang, Qiong Deng, Hang Zhou, Ken Cheng, Dongzhi Li, Can Liao. The key role of CCN2 gene in fetal unchal cystic hygromas with Turner syndrome by single-cell RNA sequencing[J]. Chinese Journal of Cell and Stem Cell(Electronic Edition), 2023, 13(04): 220-228.

目的

应用单细胞RNA测序技术(scRNA-seq)探讨细胞通讯网络因子2 (CCN2,也称为CTGF)在特纳综合征(TS)胎儿颈部淋巴水囊瘤(CH)的潜在发生机制。

方法

收集2020年1月至2020年12月于广州市妇女儿童医疗中心产前诊断中心就诊,孕11 ~ 13+6周经腹部超声检查诊断为CH而终止妊娠及相同孕周因社会因素终止妊娠病例,产前未行遗传学检测者,需同时取引产胎儿胎盘绒毛组织或骨骼肌,按照标准的操作流程进行遗传学检测。全部病例应用遗传学检测确定染色体异常类型后,CH病例中选择遗传学结果为45,X0的胎儿作为实验组,无CH病例中选择遗传学结果为46,XN的胎儿作为对照组。本研究共纳入6例样本,实验组3例,对照组3例。所有入组病例在终止妊娠后立即取颈后皮肤组织,一部分样本应用HE染色进行病理分析,一部分应用scRNA-seq分析颈后皮肤组织细胞类型并建立差异基因表达谱,并进一步应用RT-qPCR检测细胞中基因表达水平及Western blot检测相关蛋白表达情况以明确单细胞测序结果的可靠性。实验组与对照组采用独立样本t检验进行统计学分析。

结果

病理结果提示实验组表现为淋巴管增生和扩张,淋巴结增多坏死,血管减少,间质纤维丝束增多、变长,并出现大量细胞浸润组织间隙。应用scRNA-seq分析CH病例,共捕获细胞54 488个,26个聚类,其中成纤维细胞占23.1%。同时发现基质细胞蛋白CCN2高表达。进一步定位分析显示实验组中CCN2主要高表达在成纤维细胞、内皮细胞、组织干细胞和间充质干细胞。同时Western blot验证CCN2蛋白在实验组中高表达(2.47 ± 0.49比1.00 ± 0.08,P < 0.05)。

结论

病理结果表明淋巴管增生扩张和淋巴结增多坏死等淋巴管发育异常是TS胎儿CH的病理生理学基础。scRNA-seq结果表明基质细胞蛋白CCN2异常高表达可能导致TS胎儿CH。

Objective

Single-cell RNA sequencing (scRNA-seq) was used to investigate the potential pathogenesis of cystic hygromas (CH) in fetuses with Turner's syndrome (TS) .

Methods

The posterior cervical tissues of the terminated pregnancy fetus, which ended in termination pregnancy at 11-13+6 weeks were collected due to CH at Guangzhou Women and Children Medical Care Center from January 2020 to December 2020. The posterior cervical tissues of normal fetuses who terminated pregnancy due to social factors were collected at the same gestational age. For those who did not receive prenatal genetic testing, placental tissue or skeletal muscle of the induced fetus should be taken for genetic etiology testing according to standard operating procedures. Genetic testing was used in all cases to determine the chromosomal abnormality type. According to the genetic etiology, we selected the TS fetuses as the experimental group, and fetuses with genetic results 46, XN were the control group in cases without CH. A total of six cases were collected. The experimental group and control group, respectively had 3 cases. In all enrolled patients, posterior cervical skin tissue was taken immediately after termination of pregnancy, HE staining to some samples for pathological analysis, and some samples were analyzed by scRNA-seq to analyze the cell types of cervical skin tissue and establish differential gene expression profiles. Furthermore, RT-qPCR was used to study the gene expression level in cells, and Western blot was used to detect the expression of related proteins to confirm the reliability of the single-cell sequencing results. An independent sample test was used to compare the differences between groups.

Results

Pathological findings showed that pathological features of CH cases were significant lymphatic hyperplasia and dilation, increased lymph nodes and necrosis, decreased blood vessels, significantly increased and lengthened interstitial fibrofilaments, and a large number of cells infiltrated into the interstitial space. In the analysis of CH cases by scRNA-seq, a total of 54 488 cells were captured and 26 clusters were identified. Among them, fibroblasts accounted for 23.1%, and stromal cell protein CCN2 was found to have high expression. Further localization analysis showed that CCN2 was highly expressed in fibroblasts, endothelial cells, muscle cells, tissue stem cells, and mesenchymal stem cells in the experimental group. Furthermore, Western blot was to verify that CCN2 protein was significantly overexpressed in the experimental group (2.47 ± 0.49 vs 1.00 ± 0.08, P < 0.05) .

Conclusion

Pathological analysis confirmed that lymphatic abnormalities such as lymphatic hyperplasia and dilation, and increased lymph nodes and necrosis were the common pathophysiological basis of fetuses with TS. ScRNA-seq results suggested that abnormal overexpression of CCN2 may be related to CH in fetuses with TS.

图1 单细胞RNA测序实验流程图
图2 单细胞数据分析流程图
表1 引物序列信息
表2 6例样本的详细临床资料
图3 光学显微镜下观察正常胎儿与CH胎儿颈后皮肤组织病理结果注:a图中红色箭头表示淋巴结,蓝色箭头表示淋巴管,黑色箭头表示血管(苏木素染色,×40);b图为局部放大图,红色箭头表示扩张的淋巴管(苏木素染色,×100);c图为淋巴结放大图,黑色箭头表示坏死的淋巴结(苏木素染色,×200)
表3 单细胞测序数据质量控制的整体情况
图4 sc-RNA-seq技术细胞聚类结果注:a ~ b图为6个样本合并注释,共注释出26个细胞簇,标记为0 ~ 25,其中以成纤维细胞为主,共占6个细胞簇(23.1%);a、c图中0、1、3、5、7、14对应图b中占比最多的棕色板块,即成纤维细胞聚类结果;Fibroblasts:成纤维细胞;TRPS1+cells:TRPS1细胞;Myofibroblasts:肌成纤维细胞;Proliferation cells:增殖细胞;Epithelial cells:上皮细胞;T cells:T细胞;Endothelial cells:内皮细胞;Schwann cells:施旺细胞;Macrophage:巨噬细胞;Myoblasts:成肌细胞;Melanocytes:生黑色素细胞;Erythrocytes:红细胞;B cells:B细胞;Myogenic satellite cells:肌原卫星细胞
图5 实验组与对照组细胞类型的占比情况注:第一行中成纤维细胞的占比在实验组中较对照组多;Fibroblasts:成纤维细胞;TRPS1+cells:TRPS1细胞;Myofibroblasts:肌成纤维细胞;Proliferation cells:增殖细胞;Epithelial cells:上皮细胞;T cells:T细胞;Endothelial cells:内皮细胞;Schwann cells:施旺细胞;Macrophage:巨噬细胞;Myoblasts:成肌细胞;Melanocytes:生黑色素细胞;Erythrocytes:红细胞;B cells:B细胞;Myogenic satellite cells:肌原卫星细胞
图6 各细胞簇的特异性表达基因注:Myogenic satellite cells:肌原卫星细胞;B cells:B细胞;Erythrocytes:红细胞;Melanocytes:生黑色素细胞;Myoblasts:成肌细胞;Macrophage:巨噬细胞;Schwann cells:施旺细胞;Endothelial cells:内皮细胞;T cells:T细胞;Epithelial cells:上皮细胞;Proliferation cells:增殖细胞;Myofibroblasts:肌成纤维细胞;TRPS1+cells:TRPS1细胞;Fibroblasts:成纤维细胞
图7 标记基因表达热图注:图中每列代表1个细胞,每行代表1个基因,基因在不同细胞中的表达量用不同颜色表示,颜色越黄表示表达量越高;因图中纳入的细胞数及基因较多,为更清晰展示仅注明CTCF基因;Fibroblasts:成纤维细胞;TRPS1+cells:TRPS1细胞;Myofibroblasts:肌成纤维细胞;Proliferation cells:增殖细胞;Epithelial cells:上皮细胞;T cells:T细胞;Endothelial cells:内皮细胞;Schwann cells:施旺细胞;Macrophage:巨噬细胞;Myoblasts:成肌细胞;Melanocytes:生黑色素细胞;Erythrocytes:红细胞;B cells:B细胞;Myogenic satellite cells:肌原卫星细胞
图8 成纤维细胞差异基因的GO功能分析注:a图为成纤维细胞cluster0差异基因所参与的生物过程;b图为成纤维细胞cluster1差异基因所参与的生物过程;c图为成纤维细胞cluster3差异基因所参与的生物过程;d图为成纤维细胞cluster5差异基因所参与的生物过程;e图为成纤维细胞cluster7差异基因所参与的生物过程;f图为成纤维细胞cluster14差异基因所参与的生物过程;其中X轴代表富集分数,Y轴代表GO条目数;图中红色条目表示分子功能,绿色条目表示细胞组成,蓝色条目表示生物过程
图9 单细胞转录组测序验证结果注:a图为对照组,b图为实验组;横坐标表示细胞类型,纵坐标表示CCN2定量表达的倍数,黑色散点代表CCN2分子;Fibroblasts:成纤维细胞;Chondrocytes:软骨细胞;Smooth_muscle_cells:平滑肌细胞;Endothelial_cells:内皮细胞;Tissue_stem_cells:组织干细胞;MSC:间充质干细胞;Macrophage:巨噬细胞;Neurons:神经细胞;Erythroblasts:有核红细胞;NK_cell:NK细胞;T_cell:T细胞;B_cell:B细胞;Monocyte:单核细胞;CMP:髓系祖细胞;Epithelial_cells:上皮细胞
图10 胎儿颈后皮肤组织中CCN2 mRNA的表达水平注:与对照组相比,aP < 0.001
1
Masood S N, Masood M F. Case report of fetal axillo-thoraco-abdominal cystic hygroma[J]. Arch Gynecol Obstet, 2010, 281(1):111-115.
2
廖灿.胎儿结构发育异常的遗传咨询[M].北京:人民卫生出版社, 2019.
3
Noia G, Pellegrino M, Masini L, et al. Fetal cystic hygroma: the importance of natural history[J]. Eur J Obstet Gynecol Reprod Biol, 2013,170(2):407-413.
4
Yang X, Li R, Fu F, et al. Submicroscopic chromosomal abnormalities in fetuses with increased nuchal translucency and normal karyotype[J]. J Matern Fetal Neonatal Med, 2017, 30(2):194-198.
5
Zhen L, Xu L, Li D. Cystic hygroma and micromelic lower limbs: First-trimester sonographic markers of campomelicdysplasia[J]. Eur J Obstet Gynecol Reprod Biol, 2019, 238:191-193.
6
Yang X, Huang LY, Pan M, et al. Exome sequencing improves genetic diagnosis of fetal increased nuchal translucency[J]. Prenat Diagn, 2020, 40(11):1426-1431.
7
Pan M, Liu Y, Xu L, et al. First-trimester cystic hygroma and neurodevelopmental disorders: the association to remember[J]. Taiwan J Obstet Gynecol, 2020, 59(6):960-962.
8
王卓,申笑涵,施奇惠. 单细胞基因组测序技术新进展及其在生物医学中的应用[J]. 遗传, 2021, 43(2):108-117.
9
Kinashi H, Falke L L, Nguyen TQ, et al. Connective tissue growth factor regulates fibrosis-associated renal lymphangiogenesis[J]. Kidney Int, 2017, 92(4):850-863.
10
Kinashi H, Toda N, Sun T, et al. Connective tissue growth factor is correlated with peritoneal lymphangiogenesis[J]. Sci Rep, 2019, 9(1):12175. doi: 10.1038/s41598-019-48699-9.
11
张晓波,顾依群,卢利娟,等.胎儿颈部水囊状淋巴管瘤尸体解剖40例观察[J]. 中华病理学杂志, 2014, 43(3):173-176.
12
Jun JI, Lau LF. Taking aim at the extracellular matrix: CCN proteins as emerging therapeutic targets[J]. Nat Rev Drug Discov, 2011, 10(12):945-963.
13
Kubota S, Takigawa M. Cellular and molecular actions of CCN2/CTGF and its role under physiological and pathological conditions[J]. ClinSci (Lond), 2015, 128(3):181-196.
14
Crabtree GR, Olson EN. NFAT signaling: choreographing the social lives of cells[J]. Cell, 2002, 109 Suppl:S67-S79.
15
Pei G, Yao Y, Yang Q, et al. Lymphangiogenesis in kidney and lymph node mediates renal inflammation and fibrosis[J]. Sci Adv, 2019, 5(6):eaaw5075. doi: 10.1126/sciadv.aaw5075.
16
Bieniasz-Krzywiec P, Martín-Pérez R, Ehling M, et al. Podoplanin-expressing macrophages promote lymphangiogenesis and lymphoinvasion in breast cancer[J]. Cell Metab, 2019, 30(5):917-936.
17
Kinashi H, Ito Y, Mizuno M, et al. TGF-beta1 promotes lymphangiogenesis during peritoneal fibrosis[J]. J Am Soc Nephrol, 2013, 24(10):1627-1642.
18
Clavin NW, Avraham T, Fernandez J, et al. TGF-β1is a negative regulator of lymphatic regeneration during wound repair[J]. Am J Physiol Heart Circ Physiol, 2008, 295(5):H2113-H2127.
19
Oka M, Iwata C, Suzuki HI, et al. Inhibition of endogenous TGF-beta signaling enhances lymphangiogenesis[J]. Blood, 2008, 111(9):4571-4579.
20
侯靖钊,张振.外基质激活ERK信号通路促进成纤维细胞增殖及膝关节术后的纤维化[J]. 中国组织工程研究, 2021, 25(26):4168-4174.
[1] 陈玲, 李楠, 杨建乐. 微小RNA-377-3p调控自噬改善脂多糖/D-半乳糖胺诱导的急性肝衰竭的机制研究[J]. 中华危重症医学杂志(电子版), 2023, 16(02): 89-97.
[2] 李敏, 杨凡. 肌细胞因子在儿童肥胖症患儿运动减脂中的作用研究现状[J]. 中华妇幼临床医学杂志(电子版), 2023, 19(02): 125-131.
[3] 尤琳, 蔡振伟, 乔荆. Turner综合征临床研究现状[J]. 中华妇幼临床医学杂志(电子版), 2022, 18(06): 634-639.
[4] 何雪锋, 赵世新, 李珮珊, 刘恒登, 谢举临. 卡奴卡叶提取物通过增强真皮成纤维细胞功能促进大鼠创面修复的效果观察[J]. 中华损伤与修复杂志(电子版), 2023, 18(05): 405-412.
[5] 黄瑞娟, 德奇, 巴特, 周彪. 对人脐带间充质干细胞外泌体影响热损伤人皮肤成纤维细胞迁移的分析[J]. 中华损伤与修复杂志(电子版), 2023, 18(03): 229-234.
[6] 魏忠玲, 陈赟, 叶美霞, 杨珺雯, 袁竺方. 不同种类敷料治疗糖尿病足疗效比较的网状荟萃分析[J]. 中华损伤与修复杂志(电子版), 2023, 18(02): 157-165.
[7] 甄妙, 李婧婷, 王鹏, 舒斌. 对表皮干细胞外泌体影响增生性瘢痕成纤维细胞作用的观察[J]. 中华损伤与修复杂志(电子版), 2023, 18(02): 134-143.
[8] 王一淼, 何培杰. 成纤维细胞在增生性瘢痕形成中的作用及调控因素[J]. 中华损伤与修复杂志(电子版), 2023, 18(01): 78-85.
[9] 孙龙, 政红卫, 俞玲玲, 甄杰. 非小细胞肺癌FGFR3及CyclinD1表达与临床病理特征及预后分析[J]. 中华肺部疾病杂志(电子版), 2023, 16(01): 64-66.
[10] 曾静, 范皎, 史镜琪, 刘静, 李春霖, 徐国纲, 李天志. 衰弱与非衰弱高龄老人外周血单个核细胞单细胞转录组特征差异分析[J]. 中华细胞与干细胞杂志(电子版), 2023, 13(03): 159-166.
[11] 那迪娜·帕尔哈提, 黄陈. 肿瘤相关成纤维细胞在结直肠癌发生与发展及化疗耐药中的作用研究进展[J]. 中华结直肠疾病电子杂志, 2023, 12(03): 241-247.
[12] 夏庆玲, 欧三桃. 成纤维细胞生长因子21与血管钙化关系研究进展[J]. 中华肾病研究电子杂志, 2022, 11(04): 231-234.
[13] 朱新影, 赵东强. 癌相关成纤维细胞在胃癌肿瘤微环境中的作用研究进展[J]. 中华胃肠内镜电子杂志, 2022, 09(04): 225-228.
[14] 李世浩, 王玉姣, 李子豪, 吴彬, 盛银良, 齐宇. 单细胞转录组分析巨噬细胞帽状蛋白对食管鳞癌细胞增殖和转移的影响[J]. 中华胸部外科电子杂志, 2023, 10(02): 98-105.
[15] 张婧, 毛根祥. 衰老机制及抗衰老研究新进展[J]. 中华老年病研究电子杂志, 2022, 09(02): 1-8.
阅读次数
全文


摘要